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Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Aug 5, 2025 - University of Oslo
Winklhofer, Magdalena; Andersen, Øivind; Lefevre, Sjannie, 2025, "Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain", https://doi.org/10.18710/GSHJEB, DataverseNO, V1
This analysis contained the identification of DNA methylation sites in the context of CpG islands and differentially methylated regions (DMRs) with MethylScore. Further the mRNA sequencing data were analyzed to differentially expressed genes. Differentially expressed genes and identified DMRs were correlated. Finally DMRs and their expression chang...
00_README.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 14.0 KB - MD5: 3bec561921d42accccd732d7103b68fe
02_DEG_Normoxia_to_Anoxia_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 237.3 KB - MD5: 1183fbb93a0911302fb508a69e1973ce
03_DEG_Normoxia_to_Reoxygenation_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 112.7 KB - MD5: 26a87d2254360dafec5a2ed21a2b5797
04_DEG_Anoxia_to_Reoxygenation_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 89.0 KB - MD5: 970cc4e40ebf88073898e76ac4d207db
05_deg_na_GOterms_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 2.0 KB - MD5: beee8e6e337b20db792de93a67dfa130
06_deg_nr_GOterms_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 5.7 KB - MD5: 6d3074f84857b1ebc2d433f8bb496991
07_deg_ar_GOterms_csv.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 12.7 KB - MD5: 708886e9cd8c6b210ef9fc305eca7d11
08_NtoA_DMRs.CG_bed.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 293.1 KB - MD5: 599c8a36ab21e145d39f545f7bddeec6
09_NtoR_DMRs.CG_bed.txt
Aug 5, 2025 - Replication Data for: Changes in DNA Methylation During Anoxia and Reoxygenation in Crucian Carp Brain
Plain Text - 275.8 KB - MD5: baa927aaa46ef1e43c07fa2d754638ae
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