DataverseNO

Metrics

1,769,449 Downloads

Featured Dataverses

In order to use this feature you must have at least one published or linked dataverse.

Publish Dataverse

Are you sure you want to publish your dataverse? Once you do so it must remain published.

Publish Dataverse

This dataverse cannot be published because the dataverse it is in has not been published.

Delete Dataverse

Are you sure you want to delete your dataverse? You cannot undelete this dataverse.

Publication Year: 2023

2,841 to 2,850 of 11,991 Results

00_README.txt Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Plain Text - 5.0 KB - MD5: e65bacc525943c14220ac8ded5066307
1_LT50_DATA.csv Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Comma Separated Values - 11.6 KB - MD5: b7acaa46c46a39c16b6cb4c72b05f1b8 Freezing tolerance (LT50) data for all accessions
2_SNP_FILTERED_allele frequencies per accession.csv Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Comma Separated Values - 37.0 MB - MD5: 0720b589fe624a2ca5f9e58ba2ee8ca4 Allele frequencies per accession for all SNPs used in the analyses
3_HAPLOTYPE_FILTERED_allele frequencies per accession.csv Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Comma Separated Values - 51.2 MB - MD5: c7a8f87d0f52e810bfb67fdc528a8ee2 Allele frequencies per accession for all haplotype markers used in the analyses
4_Genomic Relationship Matrix_SNPs.csv Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Comma Separated Values - 1.8 MB - MD5: 85aa26187152af6cba3b090a534aa671 Genomic relationship matrix based on SNP markers
5_Genomic Relationship Matrix_HAPLOTYPES.csv Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin Comma Separated Values - 1.8 MB - MD5: 2143fc8e68c5c04f40e115c0a5c25663 Genomic relationship matrix based on haplotype markers
00_README.txt Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars Plain Text - 8.7 KB - MD5: a24140fc5c6b03154092ef5cc8535084 readme file
analysis.R Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars R Source Code - 3.9 KB - MD5: e505be5c1dbef1cd7948ab920901f806 file to reproduce the model outputs including the pre-processing. The file is adaptable for each model and parameters for each specific model can be set at the start of the Rscript. - Input: Accelerometry data including all matched behaviors within its behavioral category - Output: H2O Random Forest model results
annotated_acc_data.txt Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars Plain Text - 736.2 MB - MD5: 3227965fe6e4f41ecd5051e931ca5177 Accelerometry data including all matched behaviors within its behavioral category
functions.R Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars R Source Code - 10.6 KB - MD5: 78c206a537a8f2c783f0c89858dc62c8 source file with functions for pre-processing procedures. Analysis.R sources this file to conduct pre-processing of the data. - Select_behaviors: selecting and merging the behavioral categories into one column with behaviors - Orientation_correction: reverses the collar's axes if the collar was deployed reversed - Feature_calculation: calcul...

00_README.txt

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Plain Text - 5.0 KB -

1_LT50_DATA.csv

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Comma Separated Values - 11.6 KB -

Freezing tolerance (LT50) data for all accessions

2_SNP_FILTERED_allele frequencies per accession.csv

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Comma Separated Values - 37.0 MB -

Allele frequencies per accession for all SNPs used in the analyses

3_HAPLOTYPE_FILTERED_allele frequencies per accession.csv

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Comma Separated Values - 51.2 MB -

Allele frequencies per accession for all haplotype markers used in the analyses

4_Genomic Relationship Matrix_SNPs.csv

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Comma Separated Values - 1.8 MB -

Genomic relationship matrix based on SNP markers

5_Genomic Relationship Matrix_HAPLOTYPES.csv

Apr 3, 2023 - Replication Data for: A genome-wide association study of freezing tolerance in red clover (Trifolium pratense L.) germplasm of European origin

Comma Separated Values - 1.8 MB -

Genomic relationship matrix based on haplotype markers

00_README.txt

Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars

Plain Text - 8.7 KB -

readme file

analysis.R

Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars

R Source Code - 3.9 KB -

file to reproduce the model outputs including the pre-processing. The file is adaptable for each model and parameters for each specific model can be set at the start of the Rscript. - Input: Accelerometry data including all matched behaviors within its behavioral category - Output: H2O Random Forest model results

annotated_acc_data.txt

Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars

Plain Text - 736.2 MB -

Accelerometry data including all matched behaviors within its behavioral category

functions.R

Mar 31, 2023 - Replication Data for: Classification of behaviors of free-ranging cattle using accelerometry signatures collected by virtual fence collars

R Source Code - 10.6 KB -

source file with functions for pre-processing procedures. Analysis.R sources this file to conduct pre-processing of the data. - Select_behaviors: selecting and merging the behavioral categories into one column with behaviors - Orientation_correction: reverses the collar's axes if the collar was deployed reversed - Feature_calculation: calcul...

Add Data

Share Dataverse

Link Dataverse

Reset Modifications