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Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
Jan 5, 2022 - UiT The Arctic University of Norway
Ströhl, Florian, 2022, "Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations", https://doi.org/10.18710/Z37SBD, DataverseNO, V1
The point spread function of a fixed fluorophore with its dipole axis colinear to the optical axis appears donut-shaped when seen through a microscope, but can change to a spot when increasing the tube lens numerical aperture. This phenomenon can be simulated and studied using this Matlab software package, which implements vectorial Jones matrix fo...
00_README.txt
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
Plain Text - 884 B - MD5: aab6013bcd3b5b191f7937ffd3b9e057
Main Readme file for the whole simulation package.
01_README.txt
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
Plain Text - 186 B - MD5: 657bc27a7980345e996a4b259667af0e
Readme file for Debye backbone by James Manton.
02_README.txt
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
Plain Text - 190 B - MD5: fb6c69f9a369e3a12a5e27b699426ddb
Readme file for dipole propagator with Jones matrices by Florian Ströhl.
dipole_simulator.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 5.2 KB - MD5: 1bc4a49c2ffe32e795dd1279418a75f7
Main program file. Only this file needs to be modified for parameter setting or alternative simulations.
fft_propagate.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 1.0 KB - MD5: 5eb92f346c9ba1a88edf30a72c8e2a19
paddedfft2.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 630 B - MD5: 08e7113640223e5615ce4fdabe0643c3
polarisation_in_back_aperture.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 1.7 KB - MD5: cc7f14e07f255253323054b24912cac6
propagate.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 874 B - MD5: 8e39e1880d1a1ea352d8f7343438ec7b
propagate_principle_plane_polarisation.m
Jan 5, 2022 - Software for Quantification of the NA dependent change of shape in the image formation of a z-polarised fluorescent molecule using vectorial diffraction simulations
MATLAB Source Code - 1.3 KB - MD5: 233be5802ad0903e22abf305fcdbd85b
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