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                                            Persistent Identifier
                                            
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                                        doi:10.18710/HTCXRN | 
                                    
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                                            Publication Date
                                            
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                                        2022-09-23 | 
                                    
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                                            Title
                                            
                                         | An RNA-seq time series of the medaka pituitary gland during sexual maturation | 
                                    
                                    
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                                            Author
                                            
                                         | Ager-Wick, EirillNorwegian University of Life Sciences (NMBU)ORCID0000-0001-8368-2008
                                                         Maugars, GersendeNorwegian University of Life Sciences (NMBU)ORCID0000-0002-2090-6585
                                                         Von Krogh, KristineNorwegian University of Life Sciences (NMBU)ORCID0000-0003-4886-9699
                                                         Weltzien, Finn-ArneNorwegian University of Life Sciences (NMBU)ORCID0000-0002-5111-1558
                                                         Henkel, ChristiaanNorwegian University of Life Sciences (NMBU)ORCID0000-0001-9838-8215 | 
                                    
                                    
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                                            Point of Contact
                                            
                                         | 
                                                     Use email button above to contact.
                                                     Henkel, Christiaan (Norwegian University of Life Sciences (NMBU))  | 
                                    
                                    
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                                            Description
                                            
                                         | Directing both organismal homeostasis and physiological adaptation, the pituitary is a key endocrine gland in all vertebrates. One of its major tasks is to coordinate sexual maturation though the production and release of hormones stimulating gonad development. In order to study its developmental dynamics in the model fish medaka (Oryzias latipes), we sampled both the pituitary and the ovaries of 68 fish across the entire course of sexual maturation. We subsequently analyzed the pituitary glands using RNA-seq optimized for low input, revealing the time courses of production for individual peptide hormones. (2022-09-05) | 
                                    
                                    
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                                            Subject
                                            
                                         | Agricultural Sciences; Medicine, Health and Life Sciences | 
                                    
                                    
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                                            Keyword
                                            
                                         | Pituitary gland
                                                         Teleost fish
                                                         Transcriptomics
                                                         Medaka
                                                         Histology | 
                                    
                                    
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                                            Related Publication
                                            
                                         | Ager-Wick, E., Maugars, G., von Krogh, K. et al. An RNA-seq time series of the medaka pituitary gland during sexual maturation. Sci Data 10, 62 (2023). doi 10.1038/s41597-023-01967-w https://doi.org/10.1038/s41597-023-01967-w | 
                                    
                                    
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                                            Language
                                            
                                         | English | 
                                    
                                    
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                                            Producer
                                            
                                         | Norwegian University of Life Sciences (NMBU) (NMBU) https://www.nmbu.no/en | 
                                    
                                    
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                                            Contributor
                                            
                                         | Researcher: Ager-Wick, Eirill
                                                         Researcher: Maugars, Gersende
                                                         Researcher: Von Krogh, Kristine
                                                         Project Leader: Weltzien, Finn-Arne
                                                         Project Leader: Henkel, Christiaan | 
                                    
                                    
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                                            Funding Information
                                            
                                         | The Research Council of Norway: 251307
                                                         The Research Council of Norway: 255601
                                                         The Research Council of Norway: 248828 | 
                                    
                                    
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                                            Distributor
                                            
                                         | Norwegian University of Life Sciences (NMBU) (Norwegian University of Life Sciences (NMBU)) https://dataverse.no/dataverse/nmbu | 
                                    
                                    
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                                            Depositor
                                            
                                         | Henkel, Christiaan | 
                                    
                                    
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                                            Deposit Date
                                            
                                         | 2022-09-05 | 
                                    
                                    
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                                            Date of Collection
                                            
                                         | Start Date: 2018; End Date: 2018 | 
                                    
                                    
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                                            Data Type
                                            
                                         | Experimental data; Histology imaging; Transcriptomics | 
                                    
                                    
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                                            Software
                                            
                                         | STAR, Version: 2.7.6a
                                                         Samtools, Version: 1.10
                                                         htseq-count, Version: 0.11.2
                                                         R, Version: 4.0.3
                                                         edgeR, Version: 3.32.0
                                                         cqn, Version: 1.36.0 | 
                                    
                                    
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                                            Related Dataset
                                            
                                         | Raw Illumina sequencing data for this dataset are available at the NCBI Gene Expression Omnibus, accession GSE179598 (https://identifiers.org/geo:GSE179598) |